Job Description P37613 Confidence 99.55% Date Thu Jan 5 11:55:47 GMT 2012 Rank 90 Aligned Residues 112 % Identity 19% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		M	K	L	T	I	I	R	L	E	K	F	S	D	Q	D	R	I	D	L	Q	K	I	W	P	E	Y	S	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Q	V	D	D	N	H	R	I	Y	A	A	R	F	N	E	R	L	L	A	A	V	R	V	T	.	.	.	.	.	.	L	S	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence											.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		L	S	P	Q	V	R	T	A	H	.	.	.	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G
Template Known Secondary structure		S	G	G	G						.	.	.	G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	G	A	L	D	S	L	R	V	R	E	V	T	R	R	R	G	V	G	Q	Y	L	L	E	E	V	L	R	N	N	P	G	V	S	C	W	W	M	A	D	A	G	V	E	D	R	G	V	M	T	A	F	M	Q	A	L	G	F	T	A	Q	Q	G	G
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		L	R	G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R	X
Template Known Secondary structure													G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions