 |
Job Description | P37613 | Confidence | 91.73% | Date | Thu Jan 5 11:55:47 GMT 2012 |
Rank | 168 | Aligned Residues | 83 |
% Identity | 12% | Template | c1lrzA_ |
PDB info |
PDB header:antibiotic inhibitor | Chain: A: PDB Molecule:factor essential for expression of methicillin |
PDBTitle: x-ray crystal structure of staphylococcus aureus fema
|
Resolution | 2.10 Å |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
I | Y | A | A | R | F | N | E | R | L | L | A | A | V | R | V | T | L | S | G | T | E | G | A | L | D | S | L | R | V | R | E | V | T | R | R | R | G | V | G | Q | Y | L | L | E | E | V | L | R | N | N | P | G | V | S | C | W | W | M | A | D | A | G | V | E | D | . |
. |
. |
. |
. |
. |
. |
R | G | V | M | T | A | F |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
L | Q | E | E | H | G | N | E | L | P | I | S | A | G | F | F | F | I | N | P | F | E | V | V | Y | Y | A | G | G | T | S | N | A | F | R | H | F | A | G | S | Y | A | V | Q | W | E | M | I | N | Y | A | L | N | H | G | I | D | R | Y | N | F | Y | G | V | S | G | K | F | T | E | D | A | E | D | A | G | V | V | K | F |
Template Known Secondary structure |   |
 |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |
| G | G | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| S |
|
| S | T | T |
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
  |
  |   |
112 | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | A | L | G | F | T | A | Q | Q |
Query Conservation |   |
|   |   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |
|
Template Sequence |   |
K | K | G | Y | N | A | E | I | I | E |
Template Known Secondary structure |   |
 |  | T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
383 | . | . | . | . | . | . | 390 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|