Job Description P76224 Confidence 1.61% Date Thu Jan 5 12:20:51 GMT 2012 Rank 69 Aligned Residues 69 % Identity 22% Template c3a7kD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	W	Q	A	L	F	A	D	P	Q	L	P	Q	A	L	L	A	T	L	V	S	T	T	I	A	A	V	G	A	L	L	I	A	L	L	V	I	V	A	L	W	P	G	P	K	W	Q	R	M	C	A	R	L	P	W	L	L	A	I	P	H	V	A	F	A	T	S	A	L	L	L	F	A	D	G	G	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.																												.
Template Conservation																														.	.	.	.	.	.	.	.																												.
Template Sequence		E	L	F	E	F	V	L	N	D	P	L	L	A	S	S	L	Y	I	N	I	A	L	A	G	L	S	I	L	.	.	.	.	.	.	.	.	L	F	V	F	M	T	R	G	L	D	D	P	R	A	K	L	I	A	V	S	T	I	L	V	P	V	V	.	S	I	A	S	Y	T	G	L	A	S	G	L	T	I
Template Known Secondary structure								S	S																					.	.	.	.	.	.	.	.						S	T	T																				.											T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																												.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions