Return to main results Retrieve Phyre Job Id

Job DescriptionP76224
Confidence1.21%DateThu Jan 5 12:20:51 GMT 2012
Rank97Aligned Residues12
% Identity42%Templatec1y4mC_
PDB info PDB header:membrane proteinChain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2)
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   499500.........510
Predicted Secondary structure 

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Query Sequence  VAKWVGYVRQGL
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Template Conservation 

 








Template Sequence  LAAVVLQNRRGL
Template Known Secondary structure 
Template Predicted Secondary structure 
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   64.....70.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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