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Job DescriptionP76224
Confidence3.49%DateThu Jan 5 12:20:51 GMT 2012
Rank35Aligned Residues154
% Identity9%Templatec1oy8A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump
Resolution3.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ALAMAMLAIVAWS. . . LSVVDVAIILG. PGNPPTLAVISWQWLTQGDIDQQTKGALASLLLMLLLAAYVLLSYLLWRSWR
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Template Sequence  LYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDK
Template Known Secondary structure  TTSS

SSSGGGTGGGSS

B
SS
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Query Sequence  RTIPRVDGVRKPATPLLPGNTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLLLWLEWGPQRR
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Template Sequence  EGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVI. . . STGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRR
Template Known Secondary structure  S


TTTTTTST...T

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   956...960.........970.........980.........990. ........1000.........1010.........1020.........1030..
 
   345
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Query Sequence  Q
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Template Sequence  F
Template Known Secondary structure  T
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   1033
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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