Job Description P0A8P8 Confidence 98.85% Date Thu Jan 5 11:08:27 GMT 2012 Rank 20 Aligned Residues 97 % Identity 15% Template c3lysC_ PDB info PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	E	Q	F	L	D	A	L	W	L	E	K	N	L	A	E	N	T	L	N	A	Y	R	R	D	L	S	M	M	V	E	W	L	H	H	R	G	L	T	L	A	T	A	Q	S	D	D	L	Q	A	L	L	A	E	R	L	E	G	G	Y	K	A	T	S	S	A	R	L	L	S	A	V	R	R	L	F	Q	Y
Query Conservation
Alig confidence															.																							.	.																						.
Template Conservation															.																							.	.																						.
Template Sequence		E	Y	F	K	D	W	X	E	L	Y	K	K	N	.	A	I	D	E	X	T	Y	K	G	Y	E	Q	T	L	K	Y	L	K	T	Y	X	P	.	.	N	V	L	I	S	E	I	T	A	S	S	Y	Q	R	A	L	N	K	F	A	E	.	T	H	A	K	A	S	T	K	G	F	H	T	R	V	R	A	S	I	Q	C
Template Known Secondary structure												T	T	T	.	T	S																			S	S	.	.	S		B	T	T	T															T	.	T	S
Template Predicted Secondary structure															.																							.	.																						.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	E	K	F	R	E	D	D	P	S	A	H	L	A	S	P	K	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	E	E	G	R	L	Q	K	D	F	T	T	R	A	V	V	K	G	L	E
Template Known Secondary structure						T		S	S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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