Job Description P0A8P8 Confidence 99.09% Date Thu Jan 5 11:08:27 GMT 2012 Rank 16 Aligned Residues 89 % Identity 18% Template c2oxoA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	E	Q	F	L	D	A	L	W	L	E	K	N	L	A	E	N	T	L	N	A	Y	R	R	D	L	S	M	M	V	E	W	L	H	H	R	G	L	T	L	A	T	A	Q	S	D	D	L	Q	A	L	L	A	E	R	L	E	G	G	Y	K	A	T	S	S	A	R	L	L	S	A	V	R	R	L	F	Q	Y
Query Conservation
Alig confidence															.																							.	.																								.
Template Conservation															.																							.	.																								.
Template Sequence		S	W	L	D	R	Y	E	K	I	L	A	S	R	.	G	I	K	Q	K	T	L	I	N	Y	M	S	K	I	K	A	I	R	R	G	L	P	.	.	D	A	P	L	E	D	I	T	T	K	E	I	A	A	M	L	N	G	Y	I	D	E	G	.	K	A	A	S	A	K	L	I	R	S	T	L	S	D	A	F	R	E
Template Known Secondary structure															.																					S		.	.	S		B	G	G	G																T	T	.
Template Predicted Secondary structure															.																							.	.																								.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	E	K	F	R	E	D	D	P	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	A	E	G	H	I	T	T	N	H	V	A
Template Known Secondary structure					T	T	S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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