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Job DescriptionP0A8P8
Confidence98.99%DateThu Jan 5 11:08:27 GMT 2012
Rank17Aligned Residues102
% Identity16%Templatec2khqA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQY
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Template Sequence  DYFYQWYEVNKLP. HVSESTKRHYESAYKHIKDHFR. . HKLLKDIKRTEYQKFLNEYGL. THSYETIRKLNSYIRNAFDD
Template Known Secondary structure  TGG.GS

S..S
BGGG

.S
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   6...10........ .20.........30.........40 .........50.........60. ........70.........80.
 
   86...90.........100.........110.
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Query Sequence  LYREKFREDDPSAHLASPKLPQRLPK
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Template Sequence  AIHEGYVIKNPTYKAELHASVLEHHH
Template Known Secondary structure  TT




GGGG




GGG



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   82.......90.........100.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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