Job Description P0A8P8 Confidence 11.57% Date Thu Jan 5 11:08:27 GMT 2012 Rank 43 Aligned Residues 140 % Identity 14% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	.	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G	V	V	R	V	I	G	K	G	N	K	E	R	L	V	P	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q
Query Conservation																		.
Alig confidence																		.																																			.
Template Conservation																																																					.
Template Sequence		X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	.	D	R	T	L	A	A	N	X	Q	K	L	L	D	L	P	G	P	W	L	F	Q	T	V	D	A	G	G	G
Template Known Secondary structure																				G	G	G		B	G	G	G					T	T									G	G	G									.													T	S		S	S	B	S	S					S	S	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K	L	S	P	H	V	L	R	H	A	F	A	T	H	L	L	N	H	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	V	V	Q	M	L	L	G	H	S	D	L	S	T
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	G	.	.	.	.	.	.	.	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A	E	Y	L	A	Q	Q	G	T	E	S	S	E	R	Q	A	K	K	V	L	V	D	C	V	K	F	V	A	D	D	L	G	N	T	P	A	V	T
Template Known Secondary structure																				T	.	.	.	.	.	.	.	T	S																									S	S																				T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		276	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	I	Y	T	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	S	Y	I	C	P
Template Known Secondary structure					T	S		T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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