Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8P8
Confidence100.00%DateThu Jan 5 11:08:27 GMT 2012
Rank2Aligned Residues287
% Identity13%Templatec1ma7A_
PDB info PDB header:hydrolase, ligase/dnaChain: A: PDB Molecule:cre recombinase; PDBTitle: crystal structure of cre site-specific recombinase2 complexed with a mutant dna substrate, loxp-a8/t27
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQY
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Template Sequence  EVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRR
Template Known Secondary structure  TGGGS
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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   86...90.........100 .........110.........120.........130.........140.........150......
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Query Sequence  LYREKFREDDPSAHL. . . . . . . . . ASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLT
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Template Sequence  SGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIAYNTLLRIAEIARIR
Template Known Secondary structure  TTS

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   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   157..160.........170.. .......180.........190.........200.........210.........
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Query Sequence  MSDISLRQGVVRVIGK. . . . . . GNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMT. . . . . . . . . . .
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Template Sequence  VKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRAL
Template Known Secondary structure  SSSSTTTTS





SSSS
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   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  . . . RQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQ
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Template Sequence  EGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGAMVR
Template Known Secondary structure  T
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   262.......270.........280.........290.........300.........310.........320.........330.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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