Return to main results Retrieve Phyre Job Id

Job DescriptionP64534
Confidence16.93%DateThu Jan 5 12:09:15 GMT 2012
Rank10Aligned Residues32
% Identity6%Templatec2otrA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein hp0892; PDBTitle: solution structure of conserved hypothetical protein hp0892 from2 helicobacter pylori
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90...
Predicted Secondary structure 






















Query SS confidence 









































Query Sequence  GDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLI
Query Conservation 
 


  

   
 
 

  
 
  

 
  


   




Alig confidence 












.




.........













Template Conservation     
     

 
. 

  .........
  
 

  
 


Template Sequence  EQPLAPKYKDHPL. KGGLK. . . . . . . . . DFRECHLKPDLLLV
Template Known Secondary structure  T

STTTT


.
SS

.........S
TT
Template Predicted Secondary structure 









.




.........


Template SS confidence 









































   37..40......... 50.... .....60........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions