Job Description P77308 Confidence 2.47% Date Wed Jan 25 15:21:11 GMT 2012 Rank 67 Aligned Residues 54 % Identity 15% Template c3iuyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx53; PDBTitle: crystal structure of ddx53 dead-box domain Resolution 2.40 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	S	D	A	I	V	E	N	I	R	Q	Q	L	G	L	D	Q	P	L	Y	V	Q	F	Y	R	Y	V	S	D	L	F	H	G	D	L	G	T	S	I	R	T	G	R	P	V	L	E	E	L	R	I	F	F	P	A	T	L	E	L	A	F	G	A	L
Query Conservation
Alig confidence														.																		.	.	.	.	.	.	.	.	.	.
Template Conservation														.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	Y	P	D	L	L	K	S	I	I	R	.	V	G	I	L	K	P	T	P	I	Q	S	Q	A	W	P	I	I	.	.	.	.	.	.	.	.	.	.	L	Q	G	I	D	L	I	V	V	A	Q	T	G	T	G	K	T	L	S	Y	L	M	P	G	F
Template Known Secondary structure		T	T											.		T			S													.	.	.	.	.	.	.	.	.	.		T	T									T	T	S
Template Predicted Secondary structure														.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions