Job Description P77308 Confidence 99.64% Date Wed Jan 25 15:21:11 GMT 2012 Rank 8 Aligned Residues 231 % Identity 13% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	F	H	G	D	L	G	T	S	I	R	T	G	R	P	V	L	E	E	L	R	I	F	F	P	A	T	L	E	L	A	F	G	A	L	L	L	A	L	L	I	G	I	P	L	G	I	L	S	A	V	W	R	N	R	W	L	D	H	L	V	R	I	M	A	I	T	G	I	S	T	P	A	F	W	L	G	L
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		T	V	T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	.	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L
Template Known Secondary structure				B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	.	S	S	T	T								T	T					S
Template Predicted Secondary structure																																																								.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	V	L	F	Y	G	H	L	Q	I	L	P	G	G	G	R	L	D	D	W	L	D	P	P	T	H	V	T	G	F	Y	L	L	D	A	L	L	E	G	N	G	E	V	F	F	N	A	L	Q	H	L	I	L	P	A	L	T	L	A	F	V	H	L	G	I	V	A	R	Q	I	R	S	A	M	L	E	Q	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Sequence		I	F	K	G	L	F	N	Q	S	F	G	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	.	L	K	A	I
Template Known Secondary structure							T		S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S	S					T	T	T	S																												.	G	G	G	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.																			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.															.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	D	Y	I	R	T	A	R	A	S	G	L	P	G	W	Y	I	V	L	C	Y	A	L	P	N	A	L	I	P	S	I	T	V	L	G	L	A	L	G	D	L	L	Y	G	A	V	L	T	E	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	W	P	G	M	G	A	W	V	V	T	S	I
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A
Template Known Secondary structure			T									T				S							T	T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		298	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		Q	A	L	.	.	.	.	D	F	P	A	V	M	G	F	A	V	V	V	S	F	A	Y	V	L	V	N	L	V
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V
Template Known Secondary structure		T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions