Job Description P45552 Confidence 100.00% Date Thu Jan 5 12:03:11 GMT 2012 Rank 1 Aligned Residues 227 % Identity 91% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	N	K	A	L	L	T	H	V	D	I	N	N	V	V	C	A	M	P	L	P	Y	T	R	L	Y	E	G	L	A	S	G	L	K	A	Q	F	D	G	I	P	F	Y	Y	A	H	M	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	M	A	V	V	S	R	L	A	A	E	S	Y	L	T	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	D	N	K	A	L	L	S	H	V	D	I	N	N	V	V	C	A	X	P	L	P	Y	T	R	L	Y	E	G	L	A	S	G	L	K	A	Q	F	D	G	I	P	F	Y	Y	A	H	X	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	X	A	V	V	S	R	L	A	A	E	S	Y	L	S	Q	N
Template Known Secondary structure									T	T	S	S		S	S										S													T	T	T	T	S								S											T	T	S		S																S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	C	L	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	A	N	V	K	R	V	G	L	D	N	R	S	A	D	Q	K	I	M	T	D	V	F	F	G	G	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	C	I	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	G	N	V	K	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F	G	D	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V
Template Known Secondary structure											T	T	S	S	S									T	T		G	G	G								T	T													T	T	S																			T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	N	E	L	T	M	L	G	L	E	A	T	P	L	T	D	D	P	R	F	L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	M	Q	Q	L	L	R	A	V	V	D	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G	E	Q	E	P	S	Y
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	E	N	E	L	T	.	X	L	G	L	E	A	T	P	L	T	D	D	P	R	F	L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V	D	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G	E	Q	E	P	S	Y
Template Known Secondary structure								.		T	T								S							T	T								T	T																										T	T	S	S
Template Predicted Secondary structure								.
Template SS confidence
		162	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions