Return to main results Retrieve Phyre Job Id

Job DescriptionP45552
Confidence94.65%DateThu Jan 5 12:03:11 GMT 2012
Rank124Aligned Residues42
% Identity19%Templated1jgsa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60..... ....70..
Predicted Secondary structure 







..


Query SS confidence 


































. .






Query Sequence  TIDELANECRSSVGLTQAALKTLESSGAIRIERRG. . RNGSYLV
Query Conservation 
   

    


 

  
   
   
 
    
 ..  

 
 
Alig confidence 


































..






Template Conservation      

    
     
  
  
   
 
       


   
 
Template Sequence  TPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVK
Template Known Secondary structure 
T

TTS
TT
SS
Template Predicted Secondary structure 











Template SS confidence 











































   56...60.........70.........80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions