Job Description P45552 Confidence 96.71% Date Thu Jan 5 12:03:11 GMT 2012 Rank 43 Aligned Residues 68 % Identity 29% Template d1ft9a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.60

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		12	.	.	.	.	.	.	.	20	.							.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure												.	.	.	.	.	.									.	.	.
Query SS confidence												.	.	.	.	.	.									.	.	.
Query Sequence		V	I	T	T	L	A	R	Y	L	L	.	.	.	.	.	.	G	E	K	C	G	N	R	L	.	.	.	K	T	I	D	E	L	A	N	E	C	R	S	S	V	G	L	T	Q	A	A	L	K	T	L	E	S	S	G	A	I	R	I	E	R	R	G	R	N	G	S	Y	L	V	E	M	D	N	K	A	L	L	T	H
Query Conservation												.	.	.	.	.	.									.	.	.
Alig confidence												.	.	.	.	.	.									.	.	.																															.	.	.											.
Template Conservation																																																											.	.	.											.
Template Sequence		I	K	Q	R	I	A	G	F	F	I	D	H	A	N	T	T	G	R	Q	T	G	V	I	V	S	V	D	F	T	V	E	E	I	A	N	L	I	G	S	S	R	Q	T	T	S	T	A	L	N	S	L	I	K	E	G	Y	I	.	.	.	S	R	Q	G	R	G	H	Y	T	I	.	P	N	L	V	R	L	K	A	A
Template Known Secondary structure													T		B				S																					S															T	T	S	S	.	.	.				S	T	T					.	S	S							T
Template Predicted Secondary structure																																																											.	.	.											.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210
		83
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		213

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions