Job Description P45552 Confidence 47.91% Date Thu Jan 5 12:03:11 GMT 2012 Rank 334 Aligned Residues 160 % Identity 10% Template c3uifA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt Resolution 2.60 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																																																				.	.	.	.
Query SS confidence																		.	.	.	.	.																																																				.	.	.	.
Query Sequence		L	K	A	Q	F	D	G	I	P	F	Y	Y	A	H	M	R	.	.	.	.	.	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	M	A	V	V	S	R	L	A	A	E	S	Y	L	T	Q	K	G	L	C	L	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	.	.	.	.	C	R	K	G
Query Conservation																		.	.	.	.	.																																																				.	.	.	.
Alig confidence																		.	.	.	.	.																																																				.	.	.	.
Template Conservation
Template Sequence		F	P	E	E	L	R	K	Q	G	I	K	V	E	W	V	P	A	A	X	A	S	V	G	P	V	I	N	E	G	F	A	S	G	K	I	D	F	G	I	Y	G	D	L	P	P	I	I	L	N	A	S	K	P	T	V	Q	L	V	A	P	W	G	T	T	S	N	S	Y	L	V	V	P	K	N	S	T	A	K	S	I
Template Known Secondary structure									T	T										T	T												T	T									S										S																					T	T					S	G
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		E	S	A	N	V	K	R	V	G	L	D	N	R	S	A	D	Q	K	I	M	T	D	V	F	.	.	.	.	F	G	G	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V	V	A	E	N	E	L	T	M	L	G	L	E	A	T	P	L	T	D	D	P
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.
Template Conservation
Template Sequence		K	D	L	K	G	K	K	I	A	L	H	R	G	R	P	W	E	L	A	F	S	N	L	L	Q	S	E	G	L	T	F	K	D	F	K	I	V	N	V	N	P	Q	V	G	A	A	A	L	A	S	G	T	V	D	G	F	F	S	L	F	D	S	Y	I	L	E	D	R	G	V	G	K	I	I	W	S	T	K	T	A
Template Known Secondary structure		G	G	G	T	T	S						T	T	S	T												T	T			G	G	G	S																	T	S	S	S					S	T	T							T	T	S							G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	L	Q	A	T	E	A	V	V	L	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	D	W	K	L	X	G	G	V	W	A	R
Template Known Secondary structure			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions