Job Description P45552 Confidence 31.04% Date Thu Jan 5 12:03:11 GMT 2012 Rank 457 Aligned Residues 201 % Identity 5% Template c3g0tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aspartate aminotransferase (np_905498.1)2 from porphyromonas gingivalis w83 at 1.75 a resolution Resolution 1.75 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		K	A	L	L	T	H	V	D	I	N	N	V	V	C	A	M	P	L	P	Y	T	R	L	Y	E	G	L	A	S	G	L	K	A	Q	F	D	G	I	P	F	Y	Y	A	H	M	R	G	A	D	I	R	.	.	.	.	V	E	C	L	L	N	G	V	Y	D	M	A	V	V	S	R	L	A	A	E	S	Y	L	T	Q
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.
Template Conservation
Template Sequence		E	K	L	I	R	E	K	Q	N	E	L	H	I	K	D	L	G	X	A	S	I	R	D	L	V	A	L	V	T	N	L	E	K	A	T	G	T	K	F	C	R	X	E	X	G	V	P	G	L	P	A	P	Q	I	G	I	E	T	E	I	Q	K	L	R	E	G	V	A	S	I	Y	P	N	L	D	G	L	P	E	L
Template Known Secondary structure													T		S		G	G	G																		T										S			S																	T	G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		153		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure			.																																																						.	.	.	.
Query SS confidence			.																																																						.	.	.	.
Query Sequence		K	.	G	L	C	L	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	A	N	V	K	R	V	G	L	D	N	R	S	A	D	Q	K	I	M	T	D	V	F	F	G	G	S	D	.	.	.	.	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D
Query Conservation			.																																																						.	.	.	.
Alig confidence			.																															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																					.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		K	Q	E	A	S	R	F	A	K	L	F	V	N	I	D	I	P	A	R	A	C	V	P	T	V	G	S	X	Q	G	C	F	.	.	.	.	.	.	.	.	.	.	.	V	S	F	L	V	A	N	R	T	H	K	N	R	E	Y	G	T	L	F	I	D	P	G	F	N	L	N	K	L	Q	C	R	I	L	G	Q	.
Template Known Secondary structure																			G	G	G					S								.	.	.	.	.	.	.	.	.	.	.							T	T	S		T	T		S								S													T		.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	W	N	V	V	A	E	N	E	L	T	M	L	G	L	E	A	T	P	L	T	D	D	P	R	F	L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	M	Q	Q	L	L	R	A	V	V	D	K	H	A	L	L	A	H	Q	Q	R	V	V	S	G	E	Q	E
Query Conservation
Alig confidence		.	.	.	.																																										.	.	.	.	.
Template Conservation		.	.	.	.																																										.	.	.	.	.
Template Sequence		.	.	.	.	K	F	E	S	F	D	L	F	E	Y	R	G	E	K	L	R	E	K	L	E	S	Y	L	Q	T	G	Q	F	C	S	I	I	Y	S	N	P	N	N	P	T	W	.	.	.	.	.	Q	C	X	T	D	E	E	L	R	I	I	G	E	L	A	T	K	H	D	V	I
Template Known Secondary structure		.	.	.	.							G	G	G	G		T	T											T	T	T									S	S		T	T	T		.	.	.	.	.																		T	T
Template Predicted Secondary structure		.	.	.	.																																										.	.	.	.	.
Template SS confidence
						155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions