Return to main results Retrieve Phyre Job Id

Job DescriptionP45552
Confidence99.67%DateThu Jan 5 12:03:11 GMT 2012
Rank10Aligned Residues69
% Identity14%Templatec3by6C_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:predicted transcriptional regulator; PDBTitle: crystal structure of a transcriptional regulator from oenococcus oeni
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.. .......30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
..





















Query SS confidence 











. .


























































Query Sequence  VVITTLARYLLG. . EKCGNRLKTIDELANECRSSVGLTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLT
Query Conservation       
    
 ..   
 



   

    


 

  
   
   
 
    
   

 
       
  
Alig confidence 











..




































..



















Template Conservation 

   
   
  
 
  
  


   

    


 


 

  
   
 
..    
 
  
          
Template Sequence  QLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVI. . RTIPGKGTFITGNTASVKNS
Template Known Secondary structure  TTSS
TT
B


T

TTS..TTT
S
Template Predicted Secondary structure 

















..






Template SS confidence 








































































   12.......20.........30.........40.........50.........60.. .......70.........80..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions