Job Description P45552 Confidence 50.58% Date Thu Jan 5 12:03:11 GMT 2012 Rank 323 Aligned Residues 38 % Identity 24% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		18	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.
Predicted Secondary structure											.	.	.																						.	.	.	.
Query SS confidence											.	.	.																						.	.	.	.
Query Sequence		R	Y	L	L	G	E	K	C	G	.	.	.	N	R	L	K	T	I	D	E	L	A	N	E	C	R	S	S	V	G	L	T	Q	.	.	.	.	A	A	L	K	T	L	E	S
Query Conservation											.	.	.																						.	.	.	.
Alig confidence											.	.	.																						.	.	.	.
Template Conservation
Template Sequence		A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L	K	Y
Template Known Secondary structure		T					T	T	S	S	T	T	S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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