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Job Description | P39399 | Confidence | 96.27% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 51 | Aligned Residues | 90 |
% Identity | 8% | Template | d3broa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
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Resolution | 2.04 |
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106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
P | G | E | T | F | S | E | L | Q | L | A | R | A | A | G | V | S | P | V | V | V | R | E | Y | L | L | K | F | G | R | Y | N | L | I | H | S | E | K | R | G | Q | . |
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W | S | M | K | Q | F | D | Q | S | Y | A | E | Q | L | F | E | L | R | E | M | L | E | T | H | S | L | Q | H | F | L | N | L | P | D | H | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | N | K | E | V | L | Q | R | D | L | E | S | E | F | S | I | K | S | S | T | A | T | V | L | L | Q | R | X | E | I | K | K | L | L | Y | R | K | V | S | G | K | D | S | R | Q | K | C | L | K | L | T | K | K | . |
A | N | K | L | E | T | I | I | L | S | Y | X | D | S | D | Q | S | Q | X | T | S | G | L | N | K | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
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183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | R | W | L | Q | A | K | T | M | L | E | R | H | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | V | F | L | E | K | I | L | K | R | X | I | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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