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Job Description | P39399 | Confidence | 96.52% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 43 | Aligned Residues | 102 |
% Identity | 19% | Template | d2hr3a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
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Resolution | 2.40 |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | I | N | Q | R | Q | L | R | P | G | E | T | F | S | E | L | Q | L | A | R | A | A | G | V | S | P | V | V | V | R | E | Y | L | L | K | F | G | R | Y | N | L | I | H | S | E | K | R | G | Q | W | S | M | K | Q | F | D | Q | S | Y | A | E | Q | L | F | E | L | R | E | M | L | E | T | H | S | L | Q | H | F | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | V | L | G | A | I | D | R | L | G | G | D | V | T | P | S | E | L | A | A | A | E | R | X | R | S | S | N | L | A | A | L | L | R | E | L | E | R | G | G | L | I | V | R | H | A | R | T | . |
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R | V | S | L | S | S | E | G | R | R | N | L | Y | G | N | R | A | K | R | E | E | W | L | V | R | A | X | H | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
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. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
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178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | P | D | H | D | P | R | W | L | Q | A | K | T | M | L | E | R | H | R | L | L | R | D | N | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
C | L | D | E | S | E | R | A | L | L | A | A | A | G | P | L | L | T | R | L | A | Q | F | E | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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