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Job Description | P39399 | Confidence | 95.12% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 93 | Aligned Residues | 97 |
% Identity | 9% | Template | d2bv6a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
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Resolution | 2.8 |
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95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
F | F | T | M | I | N | Q | R | Q | L | R | P | G | E | T | F | S | E | L | Q | L | A | R | A | A | G | V | S | P | V | V | V | R | E | Y | L | L | K | F | G | R | Y | N | L | I | H | S | E | K | R | . |
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G | Q | W | S | M | K | Q | F | D | Q | S | Y | A | E | Q | L | F | E | L | R | E | M | L | E | T | H | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | P | Q | F | L | V | L | T | I | L | W | D | E | S | P | V | N | V | K | K | V | V | T | E | L | A | L | D | T | G | T | V | S | P | L | L | K | R | X | E | Q | V | D | L | I | K | R | E | R | S | E | V | D | Q | R | E | V | F | I | H | L | T | D | K | S | E | T | I | R | P | E | L | S | N | A | S | D | K | V | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Q | H | F | L | N | L | P | D | H | D | P | R | W | L | Q | A | K | T | M | L | E | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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A | S | S | L | S | Q | D | E | V | K | E | L | N | R | L | L | G | K | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
118 | |
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. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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