 |
| Job Description | P39399 | | Confidence | 21.05% | Date | Thu Jan 5 12:00:34 GMT 2012 |
| Rank | 489 | Aligned Residues | 30 |
| % Identity | 13% | Template | d1xb4a2 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Vacuolar sorting protein domain
|
| Resolution | 3.10 |
|
| | |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | |
|
|
| | | | | | | | | | | | | |
|
|
|  | | |  |
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
E | M | Y | N | I | S | R | T | T | V | R | H | I | L | S | H | L | R | E | C | G | V | L | T | Q | V | G | N | D | Y |
| Query Conservation | |
| | |
|
|
|
| |
|
|
|
|
|
| | |
| | | |
|
|
| | | | |
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
|
| | | |
| |
|
|
| | |
| | | |
|
|
| |
| | | | | |
| Template Sequence | |
E | F | H | R | M | P | E | S | L | L | Y | Y | C | L | K | P | L | C | D | R | N | R | A | T | M | L | K | D | E | N |
| Template Known Secondary structure | |
T | T | T | T |
|
| | | | | | | | | | | | | G | G | G |
|
|
|
| | |
| T | T |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | | | | | | | | | | | |
|
|
| | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
