 |
Job Description | P39399 | Confidence | 82.92% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 222 | Aligned Residues | 59 |
% Identity | 19% | Template | d1wi9a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| PCI domain (PINT motif)
|
Resolution | UNK |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | S | Q | N | L | R | H | N | V | I | N | Q | V | I | D | D | M | A | R | G | H | I | P | S | P | L | P | S | Q | S | A | L | A | E | M | Y | N | I | S | R | T | T | V | R | H | I | L | S | H | L | R | E | C | G | V | L | T | . |
Q | V | G | N | D | Y | V | I | A |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   | . |   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|
|
|
|   |   |
|   |
|   |
|
|
|   |
|   |
|
|
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
S | G | S | S | G | F | L | T | E | F | I | N | Y | I | K | K | . |
. |
. |
. |
. |
. |
. |
. |
S | K | V | V | L | L | E | D | L | A | F | Q | M | G | L | R | T | Q | D | A | I | N | R | I | Q | D | L | L | T | E | G | T | L | T | G | V | I | D | D | R | G | K | F | I |
Template Known Secondary structure |   |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
| S |  |  |
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|