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Job Description | P39399 | Confidence | 51.91% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 326 | Aligned Residues | 75 |
% Identity | 15% | Template | d1vola2 |
SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
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Resolution | 2.70 |
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34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | A | E | M | Y | N | I | S | R | T | T | V | R | H | I | L | S | H | L | R | E | C | G | V | L | T | Q | V | G | N | D | Y | V | I | A | R | K | P | D | H | D | D | G | F | A | C | T | T | A | S | M | S | E | Q | N | K | V | F | E | Q | A | F | F | T | M | I | N | Q | R | Q | L | R | P | G | E | T | F | S | E | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | C | S | N | L | C | L | P | K | Q | V | Q | M | A | A | T | H | I | A | R | K | A | V | E | L | D | L | V | P | G | R | S | P | I | . |
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S | V | A | A | A | A | I | Y | M | A | S | Q | A | S | A | E | K | R | T | Q | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | |
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. | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
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114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | L | A | R | A | A | G | V | S | P | V | V | V | R | E | Y | L | L | K | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | I | G | D | I | A | G | V | A | D | V | T | I | R | Q | S | Y | R | L | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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