Return to main results Retrieve Phyre Job Id

Job DescriptionP39399
Confidence51.91%DateThu Jan 5 12:00:34 GMT 2012
Rank326Aligned Residues75
% Identity15%Templated1vola2
SCOP infoCyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  LAEMYNISRTTVRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSEL
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Template Sequence  FCSNLCLPKQVQMAATHIARKAVELDLVPGRSPI. . . . . . . . . . . . . . . . . . . . . . . . . SVAAAAIYMASQASAEKRTQK
Template Known Secondary structure  T

TT
STT

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   218.220.........230.........240.........250. ........260.........270..
 
   114.....120.........130...
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Query Sequence  QLARAAGVSPVVVREYLLKF
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Template Sequence  EIGDIAGVADVTIRQSYRLI
Template Known Secondary structure  T

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   273......280.........290..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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