 |
Job Description | P39399 | Confidence | 20.60% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 494 | Aligned Residues | 40 |
% Identity | 5% | Template | d1t33a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 2.20 |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | Q | N | L | R | H | N | V | I | N | Q | V | I | D | D | M | A | R | G | H | I | P | S | P | L | P | S | Q | S | A | L | A | E | M | Y | N | I | S | R | T | T | V |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   | . |   |   | . | . |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |
|
Template Sequence |   |
K | G | E | Q | A | K | S | Q | L | I | A | A | A | L | A | Q | F | G | E | Y | G | L | . |
H | A | . |
. |
T | T | R | D | I | A | A | L | A | G | Q | N | I | A | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | . | G | S | . | . |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
| . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | |
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|