Return to main results Retrieve Phyre Job Id

Job DescriptionP39399
Confidence29.78%DateThu Jan 5 12:00:34 GMT 2012
Rank437Aligned Residues115
% Identity13%Templated1q06a_
SCOP infoPutative DNA-binding domain Putative DNA-binding domain DNA-binding N-terminal domain of transcription activators
Resolution2.07

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FSELQLARAAGVSPVVVREYLLKFGRYNLIHSEKRGQWSMKQFDQSYAEQLFELREM. . . . . . LETHSLQHFLNLPDHDP
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Template Sequence  MNISDVAKITGLTSKAIR. . . . FYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRH
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   1........10........ .20.........30.........40.........50.........60.........70......
 
   184.....190.........200.........210.........220.........230..
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Query Sequence  RWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQS
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Template Sequence  SADVKRRTLEKVAEIER. . . . HIEELQSMRDQLLALANACPGCPIIENL
Template Known Secondary structure  ....T



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   77..80.........90... ......100.........110.........120.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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