Job Description P39399 Confidence 87.66% Date Thu Jan 5 12:00:34 GMT 2012 Rank 202 Aligned Residues 93 % Identity 6% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																								.	.	.	.																								.																													.	.
Query SS confidence																								.	.	.	.																								.																													.	.
Query Sequence		M	I	N	Q	R	Q	L	R	P	G	E	T	F	S	E	L	Q	L	A	R	A	A	.	.	.	.	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y	N	L	I	H	S	E	.	K	R	G	Q	W	S	M	K	Q	F	D	Q	S	Y	A	E	Q	L	F	E	L	R	E	M	L	E	T	H	.	.
Query Conservation																								.	.	.	.																								.																													.	.
Alig confidence												.												.	.	.	.																								.																													.	.
Template Conservation												.
Template Sequence		E	V	M	N	I	I	W	M	K	K	.	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K
Template Known Secondary structure											S	.	S																																T	S							T	T							S	S																		S	T
Template Predicted Secondary structure												.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
									171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	L	Q	H	F	L	N	L	P	D	H	D	P	R	W	L	Q	A	K	T	M
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	F	N	S	L	V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L
Template Known Secondary structure		T													S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions