Job Description P39399 Confidence 25.15% Date Thu Jan 5 12:00:34 GMT 2012 Rank 464 Aligned Residues 87 % Identity 14% Template c3qaoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:merr-like transcriptional regulator; PDBTitle: the crystal structure of the n-terminal domain of a merr-like2 transcriptional regulator from listeria monocytogenes egd-e Resolution 1.87 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		T	F	S	E	L	Q	L	A	R	A	A	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y	N	L	I	H	S	E	K	R	G	Q	W	S	M	K	Q	F	D	Q	S	Y	A	E	Q	L	F	E	L	R	E	M	.	.	.	.	L	E	T	H	S	L	Q	H	F	L	N	L	P	D	H	D	P	R
Query Conservation																																																												.	.	.	.
Alig confidence																					.	.	.	.																																				.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		A	X	Q	I	K	E	L	A	E	L	T	G	V	S	V	R	T	L	H	.	.	.	.	H	Y	D	K	I	G	L	L	V	P	Q	K	D	D	W	N	G	Y	R	I	Y	S	E	K	D	V	D	K	L	Q	Q	I	L	F	F	K	E	L	D	F	P	L	K	K	I	Q	Q	I	L	D	D	P	L	F	D	K	N
Template Known Secondary structure			B																		.	.	.	.					T	T	S	S						T	T	T					B																	T	T													T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	Q	A	K	T	M	L	E	R	H	R	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	D	X	Q	R	H	L	L	I	E	K	K	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions