Job Description P39399 Confidence 38.60% Date Thu Jan 5 12:00:34 GMT 2012 Rank 384 Aligned Residues 66 % Identity 15% Template c3htuE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:vacuolar protein-sorting-associated protein 25; PDBTitle: crystal structure of the human vps25-vps20 subcomplex Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		R	S	Q	N	L	R	H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	.	.	.	.	.	.	.	.	E	M	Y	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	G	V	L	T	Q	V	G	N	D	Y	V	I	A	R	K	P	D
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																	.	.	.									.							.	.	.	.	.	.	.	.
Template Conservation																	.	.	.									.
Template Sequence		R	P	E	E	W	G	K	L	I	Y	Q	W	V	S	R	.	.	.	S	G	Q	N	N	S	V	F	.	T	L	Y	E	L	T	N	G	E	D	T	E	D	E	E	F	H	G	L	D	E	A	T	L	L	R	A	L	Q	A	L	Q	Q	E	H	K	A	E	I	I	T	V	S	D	G	R	G	V	K	F	F
Template Known Secondary structure																T	.	.	.	S	S		S	S				.								S	G	G	G	T	T	S	T	T	T	T																T	T	S							T	T
Template Predicted Secondary structure																	.	.	.									.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions