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Job Description | P39399 | Confidence | 70.61% | Date | Thu Jan 5 12:00:34 GMT 2012 |
Rank | 264 | Aligned Residues | 100 |
% Identity | 12% | Template | c3h0dB_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:ctsr; |
PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex
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Resolution | 2.40 Å |
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6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | L | R | H | N | V | I | N | Q | V | I | D | D | M | A | R | G | H | I | P | S | P | L | P | S | Q | S | A | L | A | E | M | Y | N | I | S | R | T | T | V | R | H | I | L | S | H | . |
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L | R | E | C | G | V | L | T | Q | V | G | N | D | Y | V | I | A | R | K | P | D | H | D | D | G | F | A | C | T | T | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | I | S | D | I | I | E | Q | Y | L | K | Q | V | L | N | X | S | D | Q | D | I | V | E | I | K | R | S | E | I | A | N | K | F | R | C | V | P | S | Q | I | N | Y | V | I | N | T | R | F | T | L | E | R | G | Y | I | V | E | S | K | R | G | G | G | G | Y | I | R | I | X | K | V | K | T | K | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
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83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | M | S | E | Q | N | K | V | F | E | Q | A | F | F | T | M | I | N | Q | R | Q | L | R | P | G | E | T | F | S | E | L | Q | L | A | R | A | A | . |
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G | V | S | P | V | V | V | R | E | Y | L | L | K | F | G | R | Y | N | L | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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S | E | A | Q | L | I | D | Q | L | L | E | L | I | D | H | R | I | S | Q | S | S | A | E | D | V | I | K | R | L | X | E | E | K | V | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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