Job Description P39399 Confidence 81.07% Date Thu Jan 5 12:00:34 GMT 2012 Rank 232 Aligned Residues 93 % Identity 12% Template c2xznT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120															.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	K	P	D	H	D	D	G	F	A	C	T	T	A	S	M	S	E	Q	N	K	V	F	E	Q	A	F	F	T	M	I	N	Q	R	Q	L	R	P	G	E	T	F	S	E	L	Q	L	A	R	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	P	V	V	V	R	E	Y	L	L	K	F
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	I	P	E	F	T	Q	W	T	T	T	S	V	A	R	E	L	A	P	Q	D	S	D	W	V	Y	I	R	T	A	A	L	A	R	K	V	Y	L	K	P	H	T	G	I	S	T	L	K	H	I	F	G	S	N	K	D	R	G	N	L	R	N	K	H	Q	A	C	H	G	K	I	L	R	W	A	L	K	S	L
Template Known Secondary structure		S								S				S	S	S		S	S			S	S	T	T																S	T	T										T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		134	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		G	R	Y	N	L	I	H	S	E	K	R	.	.	.	.	.	G	Q	W	S	M	K	Q	F	D	Q	S	Y	A	E	Q	L
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		E	D	L	K	I	I	R	K	D	K	N	S	A	T	K	K	F	S	R	V	I	T	K	E	G	M	T	E	L	N	R	I
Template Known Secondary structure				T	T	S					S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions