Job Description P39399 Confidence 81.99% Date Thu Jan 5 12:00:34 GMT 2012 Rank 225 Aligned Residues 130 % Identity 8% Template c2xv4S_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; PDBTitle: structure of human rpc62 (partial) Resolution 2.95 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		L	R	H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	E	M	Y	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	G	V	L	T	Q	V	G	N	D	Y	V	I	A	R	K	P	D	H	D	D	G	F	.	.	.	.	.	.	.	A	C
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.					.																																																.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.					.
Template Sequence		I	V	E	K	I	G	V	H	L	I	R	T	.	.	.	.	.	.	.	G	S	Q	P	.	L	R	V	I	A	H	D	T	G	T	S	L	D	Q	V	K	K	A	L	C	V	L	V	Q	H	N	L	V	S	Y	Q	V	H	K	R	G	V	V	E	Y	E	A	Q	C	S	R	V	L	R	M	L	R	Y	P	R	Y
Template Known Secondary structure													S	.	.	.	.	.	.	.		S			.									T																T	T	S							T	T	T													G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.					.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	T	A	S	M	S	E	Q	N	K	V	F	E	Q	A	F	F	T	M	I	N	Q	R	Q	L	R	P	G	E	T	F	.	S	E	L	Q	L	A	R	A	A	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y	N	L	I	H	S	E	K	R
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		I	Y	T	T	K	T	L	Y	S	D	T	G	E	L	I	V	E	E	L	L	L	N	G	K	L	T	M	S	A	V	V	K	K	V	A	D	R	L	T	E	T	T	M	D	Y	A	E	V	S	N	T	F	V	R	L	A	D	T	H	F	V	Q	R	C	P	S
Template Known Secondary structure									S																S	B															T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions