Job Description P39399 Confidence 85.09% Date Thu Jan 5 12:00:34 GMT 2012 Rank 213 Aligned Residues 118 % Identity 15% Template c2v9vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: crystal structure of moorella thermoacetica selb(377-511) Resolution 1.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	E	M	Y	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	G	V	L	T	Q	V	.	G	N	D	Y	V	I	A	R	K	P	D	H	D	D	G	F	A	C	T	T	A	S	M	S	E	Q
Query Conservation																																																							.
Alig confidence												.	.	.	.	.	.																																						.														.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	I	L	A	Q	I	I	Q	E	.	.	.	.	.	.	H	R	E	G	L	D	W	Q	E	A	A	T	R	A	S	L	S	L	E	E	T	R	K	L	L	Q	S	M	A	A	A	G	Q	V	T	L	L	R	V	E	N	D	L	Y	A	I	S	T	E	R	Y	.	.	.	.	.	.	.	.	.	.	Q	A	W
Template Known Secondary structure												.	.	.	.	.	.		S	S												T																T	T								T	T											.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440											.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		N	K	V	F	E	Q	A	F	F	T	M	I	N	Q	R	Q	L	R	P	G	E	T	F	S	E	L	Q	L	A	R	A	A	.	.	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y	N	L	I	H	S	E	K	R
Query Conservation																																		.	.
Alig confidence																							.	.										.	.
Template Conservation																							.	.
Template Sequence		W	Q	A	V	T	R	A	L	E	E	F	H	S	R	Y	P	L	R	P	G	L	.	.	A	R	E	E	L	R	S	R	Y	F	S	R	L	P	A	R	V	Y	Q	A	L	L	E	E	W	S	R	E	G	R	L	Q	L	A	A	N
Template Known Secondary structure																	T	T	S	S			.	.											T	T	S															T	T	S					S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.			.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions