Job Description P39399 Confidence 30.71% Date Thu Jan 5 12:00:34 GMT 2012 Rank 433 Aligned Residues 36 % Identity 17% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	E	M	Y	.	.	.	.	.	N	I	S	R	T	T	V
Query Conservation																																.	.	.	.	.
Alig confidence																						.										.	.	.	.	.
Template Conservation																						.
Template Sequence		G	E	L	M	K	L	I	K	E	I	V	E	N	E	D	K	R	K	P	Y	.	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V
Template Known Secondary structure		S	T	T									T	T	S		T	T	S			.													T
Template Predicted Secondary structure																						.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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