Job Description P39399 Confidence 20.02% Date Thu Jan 5 12:00:34 GMT 2012 Rank 499 Aligned Residues 61 % Identity 26% Template c2jt1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:pefi protein; PDBTitle: solution nmr structure of pefi (plasmid-encoded fimbriae regulatory)2 protein from salmonella typhimurium. northeast structural genomics3 target str82 Resolution UNK

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Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		M	S	R	S	Q	N	L	R	H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	E	M	Y	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	G	V	L	T	Q	V	.	G	N	D	Y
Query Conservation																																																															.
Alig confidence						.	.													.											.																																.
Template Conservation						.	.													.											.
Template Sequence		M	S	E	S	.	.	I	V	T	K	I	I	S	I	V	Q	E	R	.	Q	N	M	D	D	G	A	P	V	K	.	T	R	D	I	A	D	A	A	G	L	S	I	Y	Q	V	R	L	Y	L	E	Q	L	H	D	V	G	V	L	E	K	V	N	A	G	K	G
Template Known Secondary structure					T	.	.													.					T	T	S				.									T																T	T	S					S		S	S	S
Template Predicted Secondary structure						.	.													.											.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions