Job Description P39399 Confidence 39.21% Date Thu Jan 5 12:00:34 GMT 2012 Rank 380 Aligned Residues 129 % Identity 7% Template c1t6sB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a conserved hypothetical protein from chlorobium2 tepidum Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.	.																		.	.	.	.	.
Query SS confidence																																.	.																		.	.	.	.	.
Query Sequence		H	N	V	I	N	Q	V	I	D	D	M	A	R	G	H	I	P	S	P	L	P	S	Q	S	A	L	A	E	M	Y	.	.	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	.	.	.	.	.	G	V	L	T	Q	V	G	N	D	Y	V	I	A	R	K	P	D	H	D	D	G	F	A	C	T	T
Query Conservation																																.	.																		.	.	.	.	.
Alig confidence																.	.					.										.	.																		.	.	.	.	.
Template Conservation																.	.					.
Template Sequence		Q	Q	L	L	R	S	L	E	A	L	I	F	S	S	.	.	E	E	P	V	.	N	L	Q	T	L	S	Q	I	T	A	H	K	F	T	P	S	E	L	Q	E	A	V	D	E	L	N	R	D	Y	E	A	T	G	R	T	F	R	I	H	A	I	A	G	G	Y	R	F	L	T	E	P	E	F	A	D	L	V	R	Q
Template Known Secondary structure																.	.	S	S		B	.										T																							T		S							T	T								G	G	G
Template Predicted Secondary structure																.	.					.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	M	S	E	Q	N	K	V	F	E	Q	A	F	F	T	M	I	N	Q	R	Q	L	R	P	G	E	T	F	S	E	L	Q	L	A	R	A	A	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y	N	L	I	H	S	E	K	R	G
Query Conservation
Alig confidence																										.	.																			.	.	.
Template Conservation																										.	.																			.	.	.
Template Sequence		L	L	A	P	V	I	Q	R	R	L	S	R	S	M	L	E	V	L	A	V	V	A	W	H	.	.	Q	P	V	T	K	G	E	I	Q	Q	I	R	G	A	S	P	D	Y	.	.	.	S	I	D	R	L	L	A	R	G	L	I	E	V	R	G	R	A
Template Known Secondary structure				S																						.	.		S											T					S	.	.	.								T	T	S
Template Predicted Secondary structure																										.	.																			.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions