Job Description P39399 Confidence 40.65% Date Thu Jan 5 12:00:34 GMT 2012 Rank 371 Aligned Residues 80 % Identity 10% Template c1rr7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu Resolution 2.20 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	A	E	M	Y	N	I	S	R	T	T	V	R	H	I	L	S	H	L	R	E	C	G	V	L	T	Q	V	G	N	D	Y	V	I	A	R	K	P	D	H	D	D	G	F	A	C	T	T	A	S	M	S	E	Q	N	K	V	F	E	Q	A	F	F	T	M	I	N	Q	R	Q	L	R	P	G	E	T	F	S
Query Conservation
Alig confidence																										.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																										.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		R	G	E	L	S	R	L	G	V	D	P	A	H	S	L	E	I	V	V	A	I	C	K	H	.	.	.	.	.	L	G	G	G	Q	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	R	G	Q	A	L	D	S	L	I	R	D	L	R	I	W	N	D	F	.	.	.	N	G	R	N
Template Known Secondary structure								T	S	S		T	T	S												.	.	.	.	.			S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S																	.	.	.		S	S
Template Predicted Secondary structure																										.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70																		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	L	A	R	A	A	G	V	S	P	V	V	V	R	E	Y	L	L	K	F	G	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	E	L	T	T	R	Y	G	V	T	F	N	T	V	Y	K	A	I	R	R	M	R	R	L
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions