Job Description Q47706 Confidence 48.76% Date Thu Jan 5 12:37:07 GMT 2012 Rank 18 Aligned Residues 170 % Identity 13% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	L	G	Y	W	A	L	T	P	N	I	D	L	W	G	M	W	R	S	R	V	F	L	W	T	D	S	T	T	G	I	R	D	E	G	V	Y	N	S	Q	T	G	K	Y	D	K	H	R	A	R	S	F	L	A	A	S	W	H	D	D	T	S	R	Y	S	L	G	A	S	V	Q	K	D	V	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	Y	Y	T	P	N	F	G	G	F	N	A	G	F	G	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T
Template Known Secondary structure									B	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			B	T	T	B	S	S	T	T												S	S															T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.																	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
			232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure		.																																																				.	.	.	.	.	.
Query SS confidence		.																																																				.	.	.	.	.	.
Query Sequence		.	S	N	Q	I	Q	S	I	L	E	K	S	I	P	L	D	P	N	Y	T	L	K	G	E	L	L	G	F	Y	A	Q	L	E	G	L	S	R	N	T	S	Q	P	N	E	T	A	L	V	S	G	Q	L	.	.	.	.	.	.	T	W	N	A	P	W	G	S	V	F	G	S	G	G	Y	L	R	H	A	M	N	G
Query Conservation		.																																																				.	.	.	.	.	.
Alig confidence		.														.	.	.																					.	.	.													.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																.	.	.																					.	.	.																																	.	.	.	.	.	.	.	.
Template Sequence		D	R	D	E	I	T	L	G	A	S	Y	N	F	G	.	.	.	V	A	K	L	S	G	L	L	Q	Q	T	K	F	K	R	D	I	G	G	D	.	.	.	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	.	.	.	.	.	.	.	.
Template Known Secondary structure															S	.	.	.	S															T	T	S			.	.	.															T	T	T													G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.																					.	.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.													.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	V	D	T	D	I	G	Y	P	F	S	L	S	L	D	R	N	R	E	G	M	Q	S	W	Q	L	G	V	N	Y	R	L	T	P	Q	F	T	L	T	F	A	P	I	V	T	R	G	Y	E	S	.	.	.	.	.	.	.	.	.	.	.	.	S	K	R	D	V	R	I	E	G	T	G	I	L	G	G	M	N
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														S	S	S	S														T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		373	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		330	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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