Job Description Q47706 Confidence 1.89% Date Thu Jan 5 12:37:07 GMT 2012 Rank 55 Aligned Residues 197 % Identity 14% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		209	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.										.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.
Predicted Secondary structure									.																	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence									.																	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		F	L	A	A	S	W	H	.	D	D	T	S	R	Y	S	L	G	A	S	V	Q	K	D	V	.	.	.	.	.	.	.	.	.	S	N	Q	I	Q	S	I	L	E	K	S	I	P	L	D	P	N	Y	T	L	K	G	E	L	L	G	F	Y	A	Q	L	E	.	.	.	.	.	.	.	G	L	S	R	N	T	S	Q
Query Conservation									.																	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence									.																	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	G	I	A	A	K	T	G	E	N	T	T	A	A	A	T	L	G	M	G	R	S	T	W	S	E	N	S	A	N	A	K	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A	E	G	S	V
Template Known Secondary structure											T	T																	T	T																			T	T	T																					S	S	S
Template Predicted Secondary structure
Template SS confidence
		847	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		P	N	E	T	A	L	V	S	G	Q	L	T	W	N	A	P	W	G	S	V	F	G	S	G	G	Y	L	R	H	A	M	N	G	A	V	V	D	T	D	I	G	Y	P	F	S	L	S	L	D	R	N	R	E	G	M	Q	S	W	Q	L	G	V	N	Y	R	L	.	.	.	.	T	P	Q	F	T	L	T	F	A	P
Query Conservation																																																																				.	.	.	.
Alig confidence																							.	.	.																																											.	.	.	.
Template Conservation																							.	.	.
Template Sequence		N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V	P	T	G	D	L	T	.	.	.	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A
Template Known Secondary structure																							.	.	.																			S		T	T																									S	S	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.				.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	R	G	Y	E	S	S	K	R	D	V	R	I	E	G	T	G	I	L	G	G	M	N	Y	R	V	S	E	G	P	L	Q	G	M	N	F	F	L	A	A	D	K	G	R	E	K	R	D	G	S	T	L	G	D	R	L	N	Y	W	D	V	K	M	S	I	Q	Y	D	F
Query Conservation
Alig confidence																															.	.																							.	.	.	.	.	.	.	.
Template Conservation																															.	.																							.	.	.	.	.	.	.	.
Template Sequence		G	V	E	R	D	L	N	G	R	D	Y	T	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	.	.	F	G	N	G	W	N	G	L	A	R	Y	S	Y	A	G	S	K	Q	Y	G	N	H	.	.	.	.	.	.	.	.	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure							S	S																							.	.			T	T													T	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		1007	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.			.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.									.	.	1060	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions