Job Description Q47706 Confidence 12.15% Date Thu Jan 5 12:37:07 GMT 2012 Rank 29 Aligned Residues 141 % Identity 16% Template d1qj8a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.90

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.
Predicted Secondary structure																					.																																			.																	.
Query SS confidence																					.																																			.																	.
Query Sequence		S	R	Y	S	L	G	A	S	V	Q	K	D	V	S	N	Q	I	Q	S	.	I	L	E	K	S	I	P	L	D	P	N	Y	T	L	K	G	E	L	L	G	F	Y	A	Q	L	E	G	L	S	R	N	T	S	Q	.	P	N	E	T	A	L	V	S	G	Q	L	T	W	N	A	P	.	W	G	S	V	F	G	S	G
Query Conservation																					.																																			.																	.
Alig confidence																					.										.																									.																	.
Template Conservation																															.
Template Sequence		V	T	G	G	Y	A	Q	S	D	A	Q	G	Q	M	N	K	M	G	G	F	N	L	K	Y	R	Y	E	E	D	.	N	S	P	L	G	V	I	G	S	F	T	Y	T	E	K	S	R	T	A	S	S	G	D	Y	N	K	N	Q	Y	Y	G	I	T	A	G	P	A	Y	R	I	N	D	W	A	S	I	Y	G	V	V
Template Known Secondary structure												T	T	T																T	.	T		S																	T	T	S																				T	T
Template Predicted Secondary structure																															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	L	R	H	A	M	N	G	A	V	V	D	T	D	I	G	Y	P	F	S	L	S	L	D	R	N	R	E	G	M	Q	S	W	Q	L	G	V	N	Y	R	L	T	P	Q	F	T	L	T	F	A	P	I	V	T	R	G	Y	E	S	S	K	R	D	V	R	I	E	G	T	G	I	L	G	G	M	N	Y	R	V
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		G	V	G	Y	G	K	F	Q	T	T	E	Y	P	T	Y	K	N	D	T	S	D	Y	G	F	.	.	.	.	.	.	.	.	S	Y	G	A	G	L	Q	F	N	P	M	E	N	V	A	L	D	F	S	Y	E	Q	S	R	.	.	.	.	.	.	.	I	R	S	V	D	V	G	T	W	I	A	G	V	G	Y	R	F
Template Known Secondary structure													T	T	T											.	.	.	.	.	.	.	.										S	S	T	T												.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions