Job Description Q47706 Confidence 30.72% Date Thu Jan 5 12:37:07 GMT 2012 Rank 22 Aligned Residues 92 % Identity 12% Template d1by5a_ SCOP info Transmembrane beta-barrels Porins Ligand-gated protein channel Resolution 2.60

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		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		Q	S	W	Q	L	G	V	N	Y	R	L	T	P	Q	F	T	L	T	F	A	P	I	V	T	R	G	Y	E	S	S	K	R	D	V	R	I	E	G	.	.	.	.	.	.	T	G	I	L	G	G	M	N	Y	R	V	S	E	G	P	L	Q	G	M	N	F	F	L	A	A	D	K	G	R	E	K	R	D	G	S	T
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	V	E	I	E	A	K	R	P	L	S	A	S	V	N	V	V	G	S	Y	T	Y	T	D	A	E	Y	T	T	D	T	T	Y	K	G	N	T	P	A	Q	V	P	K	H	M	A	S	L	W	A	D	Y	T	F	F	D	G	P	L	S	G	L	T	L	G	T	G	G	R	Y	T	G	S	S	Y	G	D	P	A
Template Known Secondary structure												S	S	S	S																		T	T	T	T	T				T	T			S													S	S	T	T	T	T															S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		401	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	G	D	R	L	N	.	Y	W	D	V	K	M	S	I	Q	Y	D	F
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		N	S	F	K	V	G	S	Y	T	V	V	D	A	L	V	R	Y	D	L
Template Known Secondary structure				S																T
Template Predicted Secondary structure
Template SS confidence
		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions