Job Description Q47706 Confidence 2.09% Date Thu Jan 5 12:37:07 GMT 2012 Rank 51 Aligned Residues 171 % Identity 9% Template c1yo8A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:thrombospondin-2; PDBTitle: structure of the c-terminal domain of human thrombospondin-2 Resolution 2.60 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	M	A	G	S	S	Q	R	T	L	P	T	V	S	E	G	A	L	G	Y	W	A	L	T	P	N	I	D	L	W	G	M	W	R	S	R	V	F	L	W	T	D	S	T	T	G	I	R	D	E	G	V	Y	N	S	Q	T	G	K	Y	D	K	H	R	A	R	S	F	L	A	A	S	W	H	D	D	T	S	R
Query Conservation
Alig confidence																													.	.											.	.	.	.	.																												.	.	.	.
Template Conservation																													.	.											.	.	.	.	.																												.	.	.	.
Template Sequence		P	G	I	A	V	G	F	D	E	F	G	S	V	D	F	S	G	T	F	Y	V	N	T	D	R	D	D	.	.	D	Y	A	G	F	V	F	G	Y	Q	.	.	.	.	.	S	S	S	R	F	Y	V	V	X	W	K	Q	V	T	Q	T	Y	W	E	D	Q	P	T	R	A	Y	G	.	.	.	.	Y	S	G	V	S
Template Known Secondary structure		S										S	S												S	S			.	.											.	.	.	.	.		T	T									S	S					S			S	S	S					.	.	.	.		S
Template Predicted Secondary structure																													.	.											.	.	.	.	.																												.	.	.	.
Template SS confidence
		996	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.			.	.	.	.	.	.	.	1030	.	.						.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.					1060	.	.	.	.
		221	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		Y	S	L	G	A	S	V	.	.	Q	K	D	V	S	N	Q	I	Q	S	I	L	E	K	S	I	P	L	D	P	N	Y	T	L	K	G	E	L	L	G	F	Y	A	Q	L	E	G	L	S	R	N	T	S	Q	P	N	E	T	A	L	V	S	G	Q	L	T	W	N	A	P	W	G	S	V	F	G	S	G	G	Y	L
Query Conservation									.	.
Alig confidence									.	.											.	.	.														.	.	.	.									.	.	.	.	.
Template Conservation																					.	.	.														.	.	.	.									.	.	.	.	.
Template Sequence		L	K	V	V	N	S	T	T	G	T	G	E	H	L	R	N	A	L	W	.	.	.	H	T	G	N	T	P	G	Q	V	R	T	L	W	.	.	.	.	H	D	P	R	N	I	G	W	.	.	.	.	.	K	D	Y	T	A	Y	R	W	H	L	T	H	R	P	K	T	G	Y	I	R	V	L	V	H	E	G	K	Q
Template Known Secondary structure								S	S		T	T									.	.	.	S	S	S		B	T	T	T						.	.	.	.			T	T					.	.	.	.	.		T	T											T	T	T	T									T	T
Template Predicted Secondary structure																					.	.	.														.	.	.	.									.	.	.	.	.
Template SS confidence
		1065	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.				.	.	.	.	.	.	1090	.	.	.	.	.	.					.	.	.	1100	.	.	.	.						.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	A	M	N	G	A	V	V	D	T	D	I	G	Y	P	F	S	L	S	L	D	R	N	R	E	G	M	Q	S	W	Q	L	G	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	X	A	D	S	G	P	I	Y	D	Q	T	Y	A	G	G	R	L	G	L	F	V	F	S	Q	E	X	V	Y	F	S	D	L	K	Y	E
Template Known Secondary structure													S		S										S			S
Template Predicted Secondary structure
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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