 |
Job Description | P75680 | Confidence | 69.11% | Date | Thu Jan 5 12:12:59 GMT 2012 |
Rank | 89 | Aligned Residues | 36 |
% Identity | 22% | Template | c2yvhA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:transcriptional regulator; |
PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr
|
Resolution | 2.50 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | T | L | C | H | V | F | G | V | H | R | S | S | Y | K | Y | W | K | N | R | P | E | K | P | D | G | R | R | A | V | L | R | S | Q | V | L | E | L | H | G | I |
Query Conservation |   |
|   |   |
|
|   |   |
|
|
|
|
|
|   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |
| . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | D | S | L | A | E | A | T | G | L | S | K | S | G | L | I | Y | H | F | P | S | . |
. |
. |
. |
. |
. |
R | H | A | L | L | L | G | X | H | E | L | L | A | D | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  | S | S | S | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|