Job Description P43674 Confidence 81.61% Date Thu Jan 5 12:02:29 GMT 2012 Rank 33 Aligned Residues 73 % Identity 14% Template c3qnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 Resolution 3.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		S	K	Y	G	K	R	L	A	K	I	A	K	A	L	G	N	N	I	N	G	T	P	V	N	Y	K	V	Y	M	T	S	D	V	N	A	W	A	M	A	N	G	C	V	R	V	Y	S	G	L	M	.	.	.	.	.	.	D	M	M	N	D	N	E	I	E	G	V	L	G	H	E	L	G	H	V	A	L	G	H
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	V	T	L	L	E	F	Y	E	D	Y	F	S	I	P	Y	P	L	P	K	Q	D	L	A	A	I	P	D	F	Q	S	G	A	M	E	N	W	G	L	T	T	Y	R	E	S	A	L	L	F	D	A	E	K	S	S	A	S	S	K	L	G	I	T	M	T	V	A	H	E	L	A	H	Q	W	F	G	N
Template Known Secondary structure																T	S			S	S	S								T	T			S	S					T	T						G	G	G	T				T	T	T	S		T	T																		B	T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions