Job Description P77730 Confidence 99.72% Date Thu Jan 5 12:32:10 GMT 2012 Rank 228 Aligned Residues 311 % Identity 12% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.
Query Sequence		E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	.	.	.	.	.	.	.	.	.	V	I	V	E	N	P	C	F	Y	G	A	L	Q	A	L	E	R	L
Query Conservation																																																							.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		F	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	.	.	.	.	.	.	.	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N
Template Known Secondary structure		S	S	S															T			.	.	.	.	.	.	.	S							S	S	T	T	T																				T	T	T						S	S												T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																				.	.													.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																				.	.													.
Query Sequence		R	L	K	A	L	S	V	A	T	D	V	.	.	.	.	.	.	.	.	.	.	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	.	.	A	C	W	L	M	T	N	S	Q	N	P	L	.	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E
Query Conservation													.	.	.	.	.	.	.	.	.	.																				.	.													.
Alig confidence													.	.	.	.	.	.	.	.	.	.																				.	.													.
Template Conservation
Template Sequence		G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M
Template Known Secondary structure		T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B																	T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		279	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Query Sequence		D	D	V	.	.	.	.	.	.	.	.	.	.	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	R	L	Q	L	M	S	T	L	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y
Template Known Secondary structure				T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S								S	G	G	G													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
			342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410										.
Predicted Secondary structure		.																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		.	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F	L	W	L	E	L	P	E	P	L	D	.	.	.	.	.	.	.	.	.	A
Query Conservation		.																																																																						.	.	.	.	.	.	.	.	.
Alig confidence		.																														.	.	.	.												.	.	.			.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.												.	.	.			.	.
Template Sequence		G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	.	.	.	.	V	Q	Y	L	V	D	G	L	E	E	I	.	.	.	G	V	.	.	V	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F	P	A	Q
Template Known Secondary structure																			T	T												.	.	.	.											T	.	.	.	T		.	.						S	S										S	T	T	S		G	G	G
Template Predicted Secondary structure																																.	.	.	.												.	.	.			.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.				.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.										.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.															.	.
Query Sequence		G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	.	.	.	.	.	.	.	.	.	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	.	.	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E	R
Query Conservation																									.	.	.	.	.	.	.	.	.															.	.
Alig confidence																									.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E	N	A
Template Known Secondary structure																			S						B		T	T	T		S	B				S										T	T	T																			T	G
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions