Job Description P77730 Confidence 99.89% Date Thu Jan 5 12:32:10 GMT 2012 Rank 163 Aligned Residues 337 % Identity 13% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	V	P	F	A	S	A	F	P	D	P	R	L	F	.	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P	D	E	I	V	I	T	A	G	A	L	E	A	L	N	L	S
Query Conservation																.
Alig confidence																.																.	.	.																								.	.	.	.	.	.
Template Conservation																																.	.	.																								.	.	.	.	.	.
Template Sequence		Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	.	.	.	G	T	S	F	G	A	P	C	A	L	E	N	V	L	A	E	M	V	N	D	A	V	P	.	.	.	.	.	.	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V
Template Known Secondary structure					S	S	G	G	G	T	T	T	T	T		B	T													T	T	.	.	.		S			S	S																S	T	.	.	.	.	.	.	T		S						S	S
Template Predicted Secondary structure																																.	.	.																								.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		184	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.
Predicted Secondary structure							.	.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.													.	.
Query SS confidence							.	.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.													.	.
Query Sequence		L	Q	A	V	T	.	.	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	A	.	.	.	.	.	.	.	.	.	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	.	.	.	.	.	.	D	L	Q	A	L	E	L	A	L	Q	E	Y	.	.	P	V	K	A	C	W
Query Conservation							.	.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.													.	.
Alig confidence							.	.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A	G	V	I
Template Known Secondary structure																		T	T					S		G	G	G		S	S								T	T			S		S	S	S						T	T						T	T										T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A
Query Conservation
Alig confidence																																														.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	.	.	.	.	.	Y	G	G	V	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	I	I	G	G	G	L	P	V	G	A	Y	G
Template Known Secondary structure				S	S	B		S	S	S		B				T	T												T	T								T	T	T	B	T	T	T	B	.	.	.	.	.	T	T						T	T				S						G	G	G	G	T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		A	G	K	H	A	R	K	I	Q	R	L	Q	L	.	.	.	.	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	F
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																																	.	.
Template Conservation																																																																			.	.
Template Sequence		G	K	R	E	I	M	Q	L	V	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	.	.	G	H	A	A	C	G	G	Q	V	S	G	M	F
Template Known Secondary structure								T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T																							T	.	.	T									T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.
		401	.	.	.	.	.	.	.	.	410													.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	L	E	L	P	E	P	L	D	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.							.
Template Conservation																																													.	.	.	.	.	.	.	.							.
Template Sequence		G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	.	.	.	.	.	.	.	.	A	G	F	T	S	L	.	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T	V	M	S	A
Template Known Secondary structure					S	S	S					S					T	T	S															T	T					S	S	T	T	S	.	.	.	.	.	.	.	.						T	.	T																		T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.							.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.									.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions