Job Description P77730 Confidence 99.96% Date Thu Jan 5 12:32:10 GMT 2012 Rank 97 Aligned Residues 348 % Identity 13% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	N	T	Y	I	F	D	M	L	Q	A	S	R	D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	Q	G	I	T	I	S	P
Query Conservation
Alig confidence																										.	.	.									.	.	.	.	.																																	.	.	.	.	.
Template Conservation																										.	.	.									.	.	.	.	.																																	.	.	.	.	.
Template Sequence		K	F	T	P	P	P	A	S	L	R	N	P	L	I	I	P	E	K	I	M	M	G	P	G	.	.	.	P	S	N	C	S	K	R	V	.	.	.	.	.	L	T	A	M	T	N	T	V	L	S	N	F	H	A	E	L	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	Q	.	.	.	.	.	T	E	N
Template Known Secondary structure								G	G	G	S	S								B			S	S	S	.	.	.	S								.	.	.	.	.				T	T	S					T	T																				T	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.									.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.
		168	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure							.																																.	.
Query SS confidence							.																																.	.
Query Sequence		D	E	I	V	I	.	T	A	G	A	L	E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	.	.	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W
Query Conservation							.																																.	.
Alig confidence							.																																.	.
Template Conservation
Template Sequence		R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	E	E	G	D	R	V	L	I	A	V	N	G	I	W	A	E	R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	D	R	P	F	S	L	E	T	L	A	R	A	I	E	L	H	Q	P	K	C	L	F
Template Known Secondary structure		S						S	S																T	T								S	S													T	T										T	T	S																	S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	T	N	S	Q	N	P	L	G	F	T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A
Query Conservation
Alig confidence						.										.	.	.																														.	.	.	.	.	.	.
Template Conservation						.										.	.	.																														.	.	.	.	.	.	.
Template Sequence		L	T	H	G	.	D	S	S	S	G	L	L	Q	P	.	.	.	L	E	G	V	G	Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	.	.	.	.	.	.	.	M	D	K	W	E	I	D	A	V	Y	T	G	A	Q	V	L	G	A	P	P	G	I	T	P	I	S	I
Template Known Secondary structure				S		.		T	T	T	T					.	.	.		T	T								T	T								T	T	T	B	T	T	B				.	.	.	.	.	.	.	T	T	T	T	T															S	S
Template Predicted Secondary structure						.										.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.		.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.																							.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	K	H	A	R	K	I	Q	R	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G	N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	Q	I	A	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L
Template Known Secondary structure											T		S	S			S		G	G	G									T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.					400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.			.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																							.																									.	.
Query SS confidence																			.	.	.	.																							.																									.	.
Query Sequence		L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	G	Y	.	.	.	.	F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	.	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	.	.	A	W	Q	W	G	E	R	E	E	Q
Query Conservation																			.	.	.	.																							.																									.	.
Alig confidence					.	.	.												.	.	.	.																							.													.	.	.	.									.	.
Template Conservation					.	.	.																																																			.	.	.	.
Template Sequence		G	K	M	.	.	.	G	L	D	I	F	V	K	D	P	R	H	R	L	P	T	V	T	G	I	M	I	P	K	G	V	D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	T	F	.	.	.	.	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F
Template Known Secondary structure					.	.	.	T			B	S	S		S	G	G	G	B		T	T								T	T																B			B				G	G	G	T	.	.	.	.	T	T								G	G	G		S
Template Predicted Secondary structure					.	.	.																																																			.	.	.	.
Template SS confidence
		299	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		456	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	Q	L	G	K	L	I	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Y	G	F	K	E	S	L	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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