Job Description P77730 Confidence 99.92% Date Thu Jan 5 12:32:10 GMT 2012 Rank 135 Aligned Residues 337 % Identity 15% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.										.	.
Query SS confidence																																																													.	.										.	.
Query Sequence		D	P	S	V	V	P	F	A	S	A	F	P	D	P	R	L	F	P	L	Q	Q	L	N	R	S	L	A	Q	V	S	K	T	A	T	A	M	S	V	I	E	N	L	P	P	G	N	A	E	L	R	Q	A	I	A	R	R	Y	A	L	.	.	Q	G	I	T	I	S	P	D	E	.	.	I	V	I	T	A	G	A	L
Query Conservation																																																													.	.										.	.
Alig confidence												.	.	.																																															.	.										.	.
Template Conservation												.	.	.
Template Sequence		S	E	R	A	Y	N	F	N	A	G	.	.	.	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S
Template Known Secondary structure										S	S	.	.	.	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		E	A	L	N	L	S	L	Q	A	V	T	E	P	G	D	W	V	I	V	E	N	P	C	F	Y	G	.	.	A	L	Q	A	L	E	R	L	R	L	K	A	L	S	V	A	T	D	V	K	E	G	I	D	L	Q	A	L	E	L	A	L	Q	E	Y	P	V	K	A	C	W	L	M	T	N	S	Q	N	P	L	G	F
Query Conservation																												.	.
Alig confidence																												.	.																																														.
Template Conservation																																																																											.
Template Sequence		T	Q	F	A	M	I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	.	E	T	I	E	G	A
Template Known Secondary structure														T	T									S														S									G	G	G	T	T		S				G	G	G					T	T								S		.		T	T	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		T	L	T	P	Q	K	K	A	Q	L	V	A	L	L	N	Q	Y	N	V	T	L	I	E	D	D	V	Y	S	E	L	Y	F	G	R	E	K	P	L	P	A	K	A	W	D	R	H	D	G	V	L	H	C	S	S	F	S	K	C	L	V	P	G	F	R	I	G	W	V	A	A	G	K	H	A	R	K	I	Q	.	.
Query Conservation																																																																																.	.
Alig confidence					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	K	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	.	.	.	.	.	.	.	.	.	I	L	S	R	P	F	D	L	N	Q	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H
Template Known Secondary structure				S	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	.	.	.	.	.	.	.	.	.	T	T	S	S				G	G	G		S						T	T	T	T	T			S	S								G	G	G	S	S	S			T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
												334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.					.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																																	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																																	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	R	L	Q	L	M	S	T	L	S	T	S	S	P	M	Q	L	A	L	V	D	Y	L	S	T	R	R	Y	D	A	H	L	R	R	L	R	R	Q	L	A	E	R	K	Q	R	A	W	Q	A	L	L	R	Y	L	P	A	E	V	K	I	H	H	N	D	S	.	.	.	.	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																																	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																					.	.											.	.	.	.
Template Conservation																																																																.	.
Template Sequence		L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	.	.	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M
Template Known Secondary structure		S		G	G	G								T	T	T		S	S																				T	T																						T	S	.	.	T	T	S	S			S	S		G	G	G	B		S	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		F	L	W	L	E	L	P	E	P	L	D	A	G	E	L	S	L	A	A	L	T	H	H	I	S	I	A	P	G	K	M	F	S	T	G	E	N	W	S	R	F	F	R	F	N	T	A	.	W	Q	W	G	E	R	E	E	Q	A	V	K	Q	L	G	K	L	I	Q	E	R
Query Conservation																																																	.
Alig confidence																																		.	.	.	.	.	.										.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		N	I	T	F	R	L	A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	.	.	.	.	.	.	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R	S	R
Template Known Secondary structure								S															T	T			S		B			T	T	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions